diff options
Diffstat (limited to 'xlsx2csv')
| -rwxr-xr-x | xlsx2csv | 1187 |
1 files changed, 1187 insertions, 0 deletions
diff --git a/xlsx2csv b/xlsx2csv new file mode 100755 index 0000000..c731615 --- /dev/null +++ b/xlsx2csv @@ -0,0 +1,1187 @@ +#!/bin/bash +#=============================================================================== +# +# FILE: xlsx2csv.sh +# +# USAGE: ./xlsx2csv.sh [-c|--copyleft] [-d|--debug] [-v|--version] -x[|--xlsx] filename +# +# DESCRIPTION: Read an MS excel SpreadsheetML document +# extract the data to csv +# +# REQUIREMENTS: unzip | xsltproc | libxml | sqlite3 | gnu sed +# BUGS: doesn't read formatting, macros +# NOTES: does translate dates correctly! also handles null data +# quotes and commas delimited, embedded quotes are doubled +# AUTHOR: Kirk Roybal (DBA) +# http://kirk.webfinish.com +# CREATED: 12/02/2009 10:06:45 CST +# REVISION: --- +# CREDITS: +# openxmldeveloper.org for describing the format of excel date serial +# http://openxmldeveloper.org/articles/using_Spreadsheet_ML_document__as_datasource_for_heterogenous_applicationss.aspx +# http://www.ccechile.org/eventos/2007/docs/document/Response-various_Dates.pdf +# http://www.codeproject.com/KB/XML/ooxml_is_defective.aspx +# http://openxmldeveloper.org/forums/thread/597.aspx +# +# This program is free software: you can redistribute it and/or modify +# it under the terms of the GNU General Public License as published by +# the Free Software Foundation, either version 3 of the License, or +# (at your option) any later version. +# +# This program is distributed in the hope that it will be useful, +# but WITHOUT ANY WARRANTY; without even the implied warranty of +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the +# GNU General Public License for more details. +# +# You should have received a copy of the GNU General Public License +# along with this program. If not, see <http://www.gnu.org/licenses/>. +# +# Release notes: +# 1.0 (2009/12/18) -- First release available to the public +# 1.1 (2010/01/12) -- Improved date handling routine to look for all common date formats in Excel. +#=============================================================================== +version="1.1" + +function usage () { + cat <<EOS + Usage: $(basename $0) [-c|--copyleft] [-d|--debug] [-v|--version] -x[|--xlsx] filename +EOS +} + +[[ $# -gt 0 ]] || { + usage + exit 1 +} + +for arg +do + delim="" + case "$arg" in + #translate --gnu-long-options to -g (short options) + --copyleft) args="${args}-c ";; + --xlsx) args="${args}-x ";; + --debug) args="${args}-d ";; + --version) args="${args}-v ";; + #pass through anything else + *) leftchar=$(printf %1.1s "$arg") + [[ ! "$leftchar" == "-" ]] && delim="\"" + args="${args}${delim}${arg}${delim} " + ;; + esac +done + + +#Reset the positional parameters to the short options +eval set -- $args + +while getopts ":cdvx:" option 2>/dev/null +do + case $option in + c) tail -n 650 "$0" | head -n 621 | sed 's/^# //' #copyleft + exit ;; + d) set -x #debug + debug=true;; + v) echo $(basename "$0") $version; exit;; #version + x) filename=${OPTARG};; #xlsx + *) echo $OPTARG is an unrecognized option;; + esac +done + +[[ -z "$filename" ]] && { + usage + cat <<EOS + Filename is required. +EOS + exit 2 +} + +[[ -f "$filename" ]] || { + cat <<EOS + File not found. +EOS + exit 2 + +} + +#find out what inode we're in +appdir=$(dirname $0) +[[ "$appdir" == "." ]] && appdir=$(pwd) +curdir=$(pwd) +appname=$(basename $0) + +#set up some platform specific utilities +gnused=sed +platform=$(uname -s) +[[ "${platform}" == "Darwin" ]] && gnused=gsed + +#Make a working directory based on the filename +dirname=$(echo "$filename" | sed -e 's/\.xlsx$//g' -e 's/[[:space:]]/_/g') +[[ -d "$dirname" ]] || mkdir "$dirname" +#copy the source file into it +cp "$filename" "$dirname" +#get in there and push +pushd "$dirname" > /dev/null + +workfilename="$(basename "$filename")" +# Unpack the xlsx file +unzip -q "$workfilename" +#Did we get the expected structure? +[[ ! -d "xl" ]] && { + echo $filename is not an xlsx format file + popd + rm -rf "$dirname" + exit 1 +} + +#Make a sqlite3 database to do some relational work +sdbname="$(pwd)/${dirname}.sdb" +[[ $(hostname) == "wsmkroybal.javelin.pvt" ]] && { + sdbname="/Users/kroybal/sdb/${dirname}.sdb" + [[ -f "$sdbname" ]] && rm "$sdbname" +} + +#Create an SQL based string table +sql="CREATE TABLE shared_strings ( + id INTEGER PRIMARY KEY AUTOINCREMENT, + value string);" +sqlite3 "$sdbname" "$sql" #The first access of the db will create the file + +#turn the starting tags directly into newline +newline=$(echo -e '\n\r') + +#turn the xml for shared strings into sqlite sql +cat "xl/sharedStrings.xml" | + sed -e "s/<rPr>.*<\/rPr>//g" > "xl/sharedStrings.sed" +#blow away embedded garbage +$gnused -i -e "s/<r><t>.<\/t><\/r>//g" -e "s/<si>/\\$newline/g" "xl/sharedStrings.sed" +$gnused -i -e "s/<\/t>.$//g" -e "s/<t>//g" -e "/^[:space:]]*$/d" "xl/sharedStrings.sed" +$gnused -i -e "s/<t xml:space=\"preserve\">//g" -e 's/<r>//g' "xl/sharedStrings.sed" +#remove any non-printable characters, the xml tag line, and the DTD +$gnused -i -e "s/[^[:graph:] ]*//g" -e "1,2d" -e "s/'/''/g" -e 's/amp;//g' "xl/sharedStrings.sed" +#blow off any formatting junk after the closing tag +$gnused -i -e "s/<\/t>.*$//" -e "/^$/d" "xl/sharedStrings.sed" +#trim the result +#sed -i '' -e 's/^[[:space:]]*//g' -e 's/[[:space:]]*$//g' "xl/sharedStrings.sed" +#make a sql statement out of the result +$gnused -i -e "s/^/INSERT INTO shared_strings (value) VALUES ('/" -e "s/$/');/" "xl/sharedStrings.sed" +#load the stringtable +sqlite3 "$sdbname" < "xl/sharedStrings.sed" + +sql="CREATE INDEX idx_ss ON shared_strings(id,value);" +sqlite3 "$sdbname" "$sql" + +sql="CREATE TABLE sheets ( +id INTEGER PRIMARY KEY, +name varchar(200), +ordinal integer, +rid integer);" +sqlite3 "$sdbname" "$sql" + +#make an xslt file to import the sheet names +xsl="<xsl:stylesheet version=\"1.0\" xmlns:xsl=\"http://www.w3.org/1999/XSL/Transform\"> +<xsl:output method=\"text\"/> +<xsl:template match=\"sheets\"> + <xsl:apply-templates select=\"sheet\"/> +</xsl:template> +<xsl:template match=\"sheet\"> + INSERT INTO sheets(name,ordinal,rid) VALUES ('<xsl:value-of select=\"translate(@name,"'","")\"/>',<xsl:value-of select=\"@sheetId\"/>,<xsl:value-of select=\"@rid\"/>); +</xsl:template> +</xsl:stylesheet>" +echo -e "$xsl" > "xl/sheets.xsl" + +#make a simpler xml file to parse +cat "xl/workbook.xml" | + sed -e 's/.*<sheets/<sheets/' -e 's/r:id/rid/g' | + sed -e 's/<\/sheets>.*/<\/sheets>/' -e 's/"rId/"/g' > "xl/sheets.xml" +#import the sheet names +xsltproc "xl/sheets.xsl" "xl/sheets.xml" | sqlite3 "$sdbname" + +#import the format styles +sql="CREATE TABLE fmt_data ( +id INTEGER PRIMARY KEY, +numfmtid integer, +formatcode varchar(200));" +sqlite3 "$sdbname" "$sql" + +#import the format data +fmtxsl="<xsl:stylesheet version=\"1.0\" xmlns:xsl=\"http://www.w3.org/1999/XSL/Transform\"> +<xsl:output method=\"text\"/> +<xsl:template match=\"numFmts\"> + <xsl:apply-templates select=\"numFmt\"/> +</xsl:template> +<xsl:template match=\"numFmt\"> + INSERT INTO fmt_data(numfmtid,formatcode) VALUES ('<xsl:value-of select=\"@numFmtId\"/>','<xsl:value-of select=\"@formatCode\"/>'); +</xsl:template> +</xsl:stylesheet>" + +#create an xsl stylesheet for formats +echo -e "$fmtxsl" > 'xl/fmt.xsl' + +#simplify the input file +cat "xl/styles.xml" | sed -e 's/^.*<numFmts/<numFmts/' -e 's/<\/numFmts>.*/<\/numFmts>/' > "xl/fmts.xml" +#import the formats +xsltproc "xl/fmt.xsl" "xl/fmts.xml" | sqlite3 "$sdbname" + +#associate the formats to cells +sql="CREATE TABLE fmt2cell_data ( +id INTEGER PRIMARY KEY, +numfmtid integer);" +sqlite3 "$sdbname" "$sql" + +#now import the format 2 field mapping table +fmtxsl="<xsl:stylesheet version=\"1.0\" xmlns:xsl=\"http://www.w3.org/1999/XSL/Transform\"> +<xsl:output method=\"text\"/> +<xsl:template match=\"cellXfs\"> + <xsl:apply-templates select=\"xf\"/> +</xsl:template> +<xsl:template match=\"xf\"> + INSERT INTO fmt2cell_data(numfmtid) VALUES ('<xsl:value-of select=\"@numFmtId\"/>'); +</xsl:template> +</xsl:stylesheet>" + +#create an xsl stylesheet for formats +echo -e "$fmtxsl" > 'xl/fmt2cell.xsl' + +#simplify the input file +cat "xl/styles.xml" | sed -e 's/^.*<cellXfs/<cellXfs/' | + sed -e 's/<\/cellXfs>.*/<\/cellXfs>/' > "xl/fmt2cell.xml" +#import the mapping +xsltproc "xl/fmt2cell.xsl" "xl/fmt2cell.xml" | sqlite3 "$sdbname" + +#delete the formats that obviously have nothing to do with dates. +sql="DELETE FROM fmt2cell_data WHERE numfmtid=0;" +sqlite3 "$sdbname" "$sql" + +#create a table of known date formats +sql="CREATE TABLE date_formats ( +id INTEGER PRIMARY KEY, +format varchar(500));" +sqlite3 "$sdbname" "$sql" + +#Insert all the date formats we know about +insert="INSERT INTO \"date_formats\" (format) VALUES" +sql=" +$insert ('[\$-F800]dddd\,\ mmmm\ dd\,\ yyyy'); +$insert ('m/d;@'); +$insert ('mmm\ d'); +$insert ('m/d/yy;@'); +$insert ('mm/dd/yy;@'); +$insert ('m/d/yyyy;@'); +$insert ('m/d/yy\ h:mm;@'); +$insert ('[\$-409]mmmmm;@'); +$insert ('[\$-409]d\-mmm;@'); +$insert ('[\$-409]mmm\-yy;@'); +$insert ('[\$-409]mmmm\-yy;@'); +$insert ('[\$-409]mmmmm\-yy;@'); +$insert ('[\$-409]d\-mmm\-yy;@'); +$insert ('[\$-409]d\-mmm\-yyyy;@'); +$insert ('[\$-409]mmmm\ d\,\ yyyy;@'); +$insert ('[\$-409]m/d/yy\ h:mm\ AM/PM;@'); +--$insert ('_(* #,##0_);_(* \(#,##0\);_(* \"-\"_);_(@_)'); +--$insert ('_(* #,##0_);_(* \(#,##0\);_(* \"-\"??_);_(@_)'); +--$insert ('_(* #,##0.0_);_(* \(#,##0.0\);_(* \"-\"?_);_(@_)'); +--$insert ('_(* #,##0.0_);_(* \(#,##0.0\);_(* \"-\"??_);_(@_)'); +--$insert ('_(* #,##0.00_);_(* \(#,##0.00\);_(* \"-\"??_);_(@_)'); +--$insert ('_(* #,##0.0000_);_(* \(#,##0.0000\);_(* \"-\"??_);_(@_)'); +--$insert ('_(\"$\"* #,##0.00_);_(\"$\"* \(#,##0.00\);_(\"$\"* \"-\"??_);_(@_)'); +--$insert ('_(\"$\"* #,##0.000_);_(\"$\"* \(#,##0.000\);_(\"$\"* \"-\"??_);_(@_)'); +" +sqlite3 "$sdbname" "$sql" + +#see if anything matches the dates we know about +sql="UPDATE fmt_data SET formatcode = 'date' where formatcode IN + (SELECT format FROM date_formats);" +sqlite3 "$sdbname" "$sql" + +#propagate the formats from the fmt_data table +# to the fmt2cell_data table +sql="REPLACE INTO fmt2cell_data (id,numfmtid) + select fc.id, fd.formatcode + FROM fmt2cell_data fc INNER JOIN fmt_data fd + ON fc.numfmtid = fd.numfmtid + WHERE fd.formatcode='date';" +sqlite3 "$sdbname" "$sql" + +sql="CREATE TABLE cell_data ( + id INTEGER PRIMARY KEY AUTOINCREMENT, + sheet varchar(255), + cell varchar(200), + style integer, + type varchar(3), + value varchar(200), + row integer, + col varchar(20) +);" +# Leftovers from date calculation improvements +# a integer, +# b integer, +# c integer, +# d integer, +# e integer, +# f integer, +# g integer, +# y integer, +# m integer, +# day integer +sqlite3 "$sdbname" "$sql" + +#extract the data for each sheet to sqlite +cd xl/worksheets/ + +#xsltproc requires the style sheet as a file +tail -n 27 "$appdir/$appname" > data.xsl + +for file in *.xml +do + #Remove the formatting we can't read anyway to make the xslt parser simpler. + # remove any trailing lines after the sheetData + cat "$file" | sed -e 's/.*<sheetData/<sheetData/' | + sed -e 's/<\/sheetData>.*/<\/sheetData>/' -e '3,$d' > "${file}.data" + + #translate the data into sqlite INSERT statements + # 3 copies of sed streaming are an intentional speed enhancement. + xsltproc data.xsl "${file}.data" | + sed -e "s/'/''/g" -e "s/|/'/g" | sed -e 's/&/&/g' | + sed -e "/'');[[:space:]]*$/d" | sqlite3 "$sdbname" +# > "${file}.sql" +# < "${file}.sql" + + #Add the sheet name to the data we just imported + bname=$(basename "$file" .xml | sed -e "s/'//g" -e 's/[[:alpha:]]*//g') + sql="UPDATE cell_data SET sheet=(SELECT name FROM sheets WHERE rid = ${bname}) + WHERE sheet is null;" + sqlite3 "$sdbname" "$sql" +done + +#remove any blank cells +sql="DELETE FROM cell_data WHERE value = '';" +sqlite3 "$sdbname" "$sql" + +#index the type column +sql="CREATE INDEX idx_cd ON cell_data(type);" +sqlite3 "$sdbname" "$sql" + +#shared string table is zero based in file, 1 based in sdb +sql="UPDATE cell_data SET value=value+1 WHERE type='s';" +sqlite3 "$sdbname" "$sql" + +#update the cells with the string data +sql="REPLACE INTO cell_data(id,value,sheet,cell,style,type,row,col) + SELECT cd.id, ss.value, cd.sheet, cd.cell, 'str', '', cd.row, cd.col + FROM shared_strings ss INNER JOIN cell_data cd ON ss.id = cd.value + WHERE cd.type = 's';" +sqlite3 "$sdbname" "$sql" + +#basic data formats with id<=40 that are dates. +# these are not supplied in the xlsx file +sql="UPDATE fmt2cell_data SET numfmtid = 'date' + WHERE numfmtid IN (14,16);" +sqlite3 "$sdbname" "$sql" + +#Other subformats that are also dates. +sql="REPLACE INTO cell_data (id,value,sheet,cell,style,type,row,col) + SELECT cd.id, cd.value,cd.sheet,cd.cell,'2','d',cd.row,cd.col + FROM cell_data cd INNER JOIN fmt2cell_data fc ON cd.style+1=fc.id + WHERE fc.numfmtid = 'date' and cd.style <> '2' + AND cd.type='' AND cd.value<>'';"; +sqlite3 "$sdbname" "$sql" + +#Fix the Y1900 leap year bug +sql="UPDATE cell_data SET value='1900-02-29 00:00:00',style='s' + WHERE value=60 AND style='2';" +sqlite3 "$sdbname" "$sql" + +#Other dates less than 60 are off by 1 +sql="UPDATE cell_data SET value=value+1 WHERE value < 60 AND style='2';" +sqlite3 "$sdbname" "$sql" + +#convert the Julian serial to date +# add days to convert to unix epoch +# convert epoch to ISO date as text +# end up with YYYY-MM-DD +#Much easier and more reliable +sql="UPDATE cell_data SET value=datetime(value+2415017.5) + WHERE style='2' and value <> '';" +sqlite3 "$sdbname" "$sql" + +[[ -z "A" ]] && { +#old school date calculation +# this code is a non-buggy implementation of the +# buggy code found at +# http://www.codeproject.com/KB/datetime/exceldmy.aspx?print=true +# The basic idea here is to convert the date to a unix epoch +# add some days to make sure that 1970-01-01 < date < 2038-01-01 +# because MS date functions only work properly within that range +# then re-implement MS date math logic to find the date +# then subtract the bias in years from the date. +# We don't do things like that in Linux land. +sql="UPDATE cell_data SET a=value+68569+2415019 WHERE style='2';" +sqlite3 "$sdbname" "$sql" +sql="UPDATE cell_data SET b=cast((4*a)/146097.0 as integer) WHERE style='2';" +sqlite3 "$sdbname" "$sql" +sql="UPDATE cell_data SET c=a-((146097*b+3)/4) WHERE style='2';" +sqlite3 "$sdbname" "$sql" +sql="UPDATE cell_data SET d=cast((4000*(c+1))/1461001.0 as integer) WHERE style='2';" +sqlite3 "$sdbname" "$sql" +sql="UPDATE cell_data SET e=(c-cast(1461.0*d/4 as integer)+31 WHERE style='2';" +sqlite3 "$sdbname" "$sql" +sql="UPDATE cell_data SET f=cast((80*e)/2447 as integer) WHERE style='2';" +sqlite3 "$sdbname" "$sql" +sql="UPDATE cell_data SET g=cast(f/11 as integer) WHERE style='2';" +sqlite3 "$sdbname" "$sql" +sql="UPDATE cell_data SET day=e-cast((2447.0*f)/80 as integer) WHERE style='2';" +sqlite3 "$sdbname" "$sql" +sql="UPDATE cell_data SET m=cast(f+2.0-(12.0*g) as integer) WHERE style='2';" +sqlite3 "$sdbname" "$sql" +sql="UPDATE cell_data SET y=100*(b-49)+d+g WHERE style='2';" +sqlite3 "$sdbname" "$sql" + +#Finally! We have a date! +sql="UPDATE cell_data + SET value=y || '-' || m || '-' || day, style='' WHERE style='2';" +sqlite3 "$sdbname" "$sql" +} + +#don't show nulls as '-' (dash) +sql="UPDATE cell_data SET value='', style='' WHERE style='3';" +sqlite3 "$sdbname" "$sql" + +#get the row numbers as integers +#Get the column indices as letters [A-ZZ] +sql="UPDATE cell_data + SET row=CAST(trim(cell,'ABCDEFGHIJKLMNOPQRSTUVWXYZ') as int), + col=trim(cell,'0123456789');" +sqlite3 "$sdbname" "$sql" + +#blow away CRLF in the values +sql="UPDATE cell_data SET value=replace(value,x'0d','');" +sql="$sql UPDATE cell_data SET value=replace(value,x'0a','');" +sqlite3 "$sdbname" "$sql" + +#set up column list from A-ZZ collated in spreadsheet order +sql="CREATE TABLE columns ( id integer primary key, title varchar(3));" +sqlite3 "$sdbname" "$sql" +#create A-Z +for ((i=65;i<=90;i++)) +do + #convert ascii value to char + char=$(printf "\\$(printf "%03o" $i)") + #insert into db + sql="INSERT INTO columns (title) VALUES ('$char');" + sqlite3 "$sdbname" "$sql" +done +# Create AA-ZZ +for ((i=1;i<=26;i++)) +do + sql="INSERT INTO columns (title) + SELECT (SELECT title FROM columns WHERE id=$i) || title + FROM columns where id <= 26;" + sqlite3 "$sdbname" "$sql" +done + +#index the sheet name +sql="CREATE INDEX idx_cd_sheet ON cell_data(sheet);" +sqlite3 "$sdbname" "$sql" +# and the sheet with col +sql="CREATE INDEX idx_cd_sheet_col ON cell_data(sheet,col);" +sqlite3 "$sdbname" "$sql" +# and the sheet with row +sql="CREATE INDEX idx_cd_sheet_row ON cell_data(sheet,row);" +sqlite3 "$sdbname" "$sql" +newline=" +" +#Change the internal separator to CRLF +IFS=$'\n' +#walk the table and output the results as csv files. +# for each sheet (csv file name); for each row, for each value +sql="SELECT sheet FROM cell_data group by sheet order by sheet;" +sheets=$(sqlite3 "$sdbname" "$sql") +for sheet in $sheets +do + #the columns.id field now collates the columns in spreadsheet order + # all we need to know is the maximum number of columns per sheet + sql="SELECT c.id FROM columns c INNER JOIN cell_data d ON c.title = d.col + WHERE sheet='$sheet' ORDER by c.id DESC limit 1;" + maxcol=$(sqlite3 "$sdbname" "$sql") + + #no single quotes in filename + csv=${sheet//\'/} + csv="${curdir}/${dirname}_${csv// /_}.csv" + + #get the rows for the sheet + sql="SELECT row FROM cell_data WHERE sheet='$sheet' + GROUP BY row ORDER BY row;" + rows=$(sqlite3 "$sdbname" "$sql") + for row in $rows + do + #make sure we have a field represented for every column, even if it's empty + sql="SELECT d.value FROM columns c left join cell_data d + ON c.title = d.col AND d.sheet='$sheet' AND d.row=$row + WHERE c.id <= $maxcol;" + sqlite3 "$sdbname" "$sql" | #extract the data for the row + sed -e 's/"/""/g' -e 's/^/"/' -e 's/$/"/' | #escape embedded quotes + tr '\n' ',' | sed "s/,$//" >> "$csv" #convert to csv + done +done + +[[ $(hostname) == "wsmkroybal.javelin.pvt" ]] && mv "$sdbname" . + +#return to the invocation inode +popd > /dev/null + +#clean up the temp folder +[[ -z $debug ]] && rm -rf "$dirname" + +#clean end +exit + +# GNU GENERAL PUBLIC LICENSE +# Version 3, 29 June 2007 +# +# Copyright (C) 2007 Free Software Foundation, Inc. <http://fsf.org/> +# Everyone is permitted to copy and distribute verbatim copies +# of this license document, but changing it is not allowed. +# +# Preamble +# +# The GNU General Public License is a free, copyleft license for +# software and other kinds of works. +# +# The licenses for most software and other practical works are designed +# to take away your freedom to share and change the works. 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